Homepage
Navigation
Search
Content
Footer
Contact
Sitemap
Scientific Center for Optical and Electron Microscopy
Main Navigation
The Center
The Center
See overview
close
Organization
Main Contacts
How to find us
People
Instruments
Competence Centres and other Microscopy Facilities
ScopeM Publication and Acknowledgment Policy
Newsletter
Teaching & Training
(active)
Teaching & Training
See overview
close
ScopeM Microscopy Training Program
Introductory Courses
Advanced Courses
One-to-One Training
Schools, Workshops and Events
Course Catalogue
Knowledge Resources
Overviews and Basics
Microscope Performance Evaluation
Labeling, Mounting and Fluorescent Proteins
Spinning Disk
TIRF
CARS / Raman Microscopy
Quantitative phase imaging/ Holography microsocpy
Two Photon / Second harmonic
Superresolution
Expansion Microscopy
Light Sheet Microscopy /SCAPE
Image Processing, Quantitative Microscopy, Colocalisation
FRET / FLIM / FCS
FRAP / FLIP / Microirradiation
Deconvolution
Imaging Ethics, CSI Cell Biology
Cell Cycle, Mitosis, Microtubules
Plant Imaging
Yeast Imaging
Imaging in 3D Matrices / Organoids
Histology
Laser Capture Microdissection
add
Display all
Research activities
Research activities
See overview
close
Publications of ScopeM staff
Publications of ScopeM users
Software
CIDRE
Cellstar
YIT
Essential Vision
Competences
Competences
See overview
close
Instruments
Light Microscopy
Fluorescence microscopy
Electron Microscopy
Transmission Electron Microscopy
Scanning Electron Microscopy
Volume EM
Cryo-EM
Atom Probe Tomography
Correlative Microscopy
CLEM Applications
Sample Preparation
Image and Data Analysis
Image Clinics
Deconvolution
IT
Projects & Booking
Projects & Booking
See overview
close
Working with ScopeM
How to become a ScopeM user
Guidelines for user lab
Pricing
Booking
Booking rules
Equipment Handling
ScopeM off-hour regulations
PPMS Booking system
Search
EN
Departments
ETH Zurich
ScopeM
Language Selection
English
You are here
Homepage
chevron_right
Teaching & Training
chevron_right
…
Knowledge Resources
chevron_right
Plant Imaging
Plant Imaging
2025
external page
Plants in the expansion era: Recent advances in expansion microscopy in plant systems Kevin L Cox,Kirk J Czymmek
external page
Best practices in plant fluorescence imaging and reporting: A primer Kirk J Czymmek,Yoselin Benitez-Alfonso,Tessa Burch-Smith, Luigi F Di Costanzo,Georgia Drakakaki,Michelle Facette, Daniel Kierzkowski,Anastasiya Klebanovych, Ivan Radin,Suruchi Roychoudhry,Heather E McFarlane
2022
external page
Imaging plant cells and organs with light-sheet and super-resolution microscopy Miroslav Ovečka,Jiří Sojka,Michaela Tichá,George Komis,Jasim Basheer,Cintia Marchetti, Olga Šamajová,Lenka Kuběnová, Jozef Šamaj
2021
external page
Imaging the living plant cell: From probes to quantification. Leia Colin, Raquel Martin-Arevalillo, Simone Bovio, Amélie Bauer, Teva Vernoux, Marie-Cecile Caillaud, Benoit Landrein, Yvon Jaillais
external page
Advances in Two-Photon Imaging in Plants. Yoko Mizuta
external page
Advances in Synthetic Fluorescent Probe Labeling for Live-Cell Imaging in Plants. Noriyoshi Yagi, Akira Yoshinari , Ryu J Iwatate, Reika Isoda, Wolf B Frommer, Masayoshi Nakamura
2020
external page
A Practical Guide to Live-Cell Imaging of Meiosis in Arabidopsis. Prusicki MA, Hamamura Y, Schnittger A.
external page
Autofluorescence in Plants. Lloyd Donaldson
2019
external page
Structured illumination approaches for super-resolution in plant cells. Shaw SL, Thoms D, Powers J.
2018
external page
Green light for quantitative live-cell imaging in plants. Grossmann G, Krebs M, Maizel A, Stahl Y, Vermeer JEM, Ott
external page
Advanced microscopy methods for bioimaging of mitotic microtubules in plants. Vyplelová P, Ovečka M, Komis G, Šamaj J.
2016
external page
A Versatile Optical Clearing Protocol for Deep Tissue Imaging of Fluorescent Proteins in Arabidopsis thaliana. Musielak TJ, Slane D, Liebig C, Bayer M.
external page
Time Gating of Chloroplast Autofluorescence Allows Clearer Fluorescence Imaging In Planta. Kodama Y.
external page
Fluorescence Imaging of the Cytoskeleton in Plant Roots. Julia Dyachok, Ana Paez-Garcia, Cheol-Min Yoo, Karuppaiah Palanichelvam, and Elison B. Blancaflor
external page
Microtubules in Plant Cells: Strategies and Methods for Immunofluorescence, Transmission Electron Microscopy, and Live Cell Imaging. Katherine Celler , Miki Fujita , Eiko Kawamura , Chris Ambrose , Klaus Herburger , Andreas Holzinger , and Geoffrey O. Wasteneys
2015
external page
An optical imaging chamber for viewing living plant cells and tissues at high resolution for extended periods. Grant Calder, Chris Hindle, Jordi Chan and Peter Shaw
external page
Super-resolution Microscopy in PlantCellImaging. George Komis, Olga Samajova, Miroslav Ovečka, and Jozef Samaj
external page
Protocol: an improved and universal procedure for whole-mount immunolocalization in plants. Pasternak T, Tietz O, Rapp K, Begheldo M, Nitschke R, Ruperti B, Palme K.
2014
external page
Fluorescent Protein-Based Reporters of the Actin Cytoskeleton in Living Plant Cells: Fluorophore Variant, Actin Binding Domain, and Promoter Considerations Dyachok J, Sparks JA, Liao F, Wang YS, Blancaflor EB.
external page
FRET-FLIM applications in plant systems. Bücherl CA, Bader A, Westphal AH, Laptenok SP, Borst JW.
2013
external page
Live-cell imaging of microtubules and microtubule-associated proteins in Arabidopsis thaliana. Lucas J.
external page
Quantification of Förster resonance energy transfer by monitoring sensitized emission in living plant cells. Müller SM, Galliardt H, Schneider J, Barisas BG, Seidel T.
external page
Live-cell analysis of plant reproduction: live-cell imaging, optical manipulation, and advanced microscopy technologies. Daisuke Kurihara, Yuki Hamamura and Tetsuya Higashiyama
2012
external page
Maize histone H2B-mCherry: a new fluorescent chromatin marker for somatic and meiotic chromosome research. Howe ES, Clemente TE, Bass HW.
external page
Integrated genetic and computation methods for in planta cytometry. Federici F, Dupuy L, Laplaze L, Heisler M, Haseloff J.
external page
The quest for four-dimensional imaging in plant cell biology: it's just a matter of time. Domozych DS.
external page
A simple method for imaging Arabidopsis leaves using perfluorodecalin as an infiltrative imaging medium. Littlejohn GR, Love J.
external page
Confocal microscopy in plant-pathogen interactions. Hardham AR.
2011
external page
Live Cell Imaging Reveals Structural Associations between the Actin and Microtubule Cytoskeleton in Arabidopsis. Sampathkumar A, Lindeboom JJ, Debolt S, Gutierrez R, Ehrhardt DW, Ketelaar T, Persson S.
2010
external page
Super-resolution imaging of plasmodesmata using 3D-structured illumination microscopy(3D-SIM). Fitzgibbon J, Bell K, King E, Oparka K.
external page
High efficiency transport of quantum dots into plant roots with the aid of silwet L-77. Hu Y, Li J, Ma L, Peng Q, Feng W, Zhang L, He S, Yang F, Huang J, Li L.
external page
Enhanced fluorescence imaging in chlorophyll-suppressed tobacco tissues using virus-induced gene silencing of the phytoene desaturase gene. Zhang L, Gase K, Baldwin I, Gális I.
2009
external page
Fluorescent probes for plant imaging Invitrogen
2008
external page
Chlorophyll fluorescence emission spectrum inside a leaf. Pedrós R, Moya I, Goulas Y, Jacquemoud S.
external page
An easy method using glutaraldehyde-introduced fluorescence for the microscopic analysis of plant biotrophic interactions. Fester T1, Berg RH, Taylor CG.
2006
external page
Imaging the live plant cell. Shaw SL.
Related Content
chevron_right
Overviews and Basics
chevron_right
Microscope Performance Evaluation
chevron_right
Labeling, Mounting and Fluorescent Proteins
chevron_right
Spinning Disk
chevron_right
TIRF
chevron_right
CARS / Raman Microscopy
chevron_right
Quantitative phase imaging/ Holography microsocpy
chevron_right
Two Photon / Second harmonic
chevron_right
Superresolution
chevron_right
Expansion Microscopy
chevron_right
Light Sheet Microscopy /SCAPE
chevron_right
Image Processing, Quantitative Microscopy, Colocalisation
chevron_right
FRET / FLIM / FCS
chevron_right
FRAP / FLIP / Microirradiation
chevron_right
Deconvolution
chevron_right
Imaging Ethics, CSI Cell Biology
chevron_right
Cell Cycle, Mitosis, Microtubules
chevron_right
Yeast Imaging
chevron_right
Imaging in 3D Matrices / Organoids
chevron_right
Histology
chevron_right
Laser Capture Microdissection
chevron_left
Knowledge Resources
JavaScript has been disabled in your browser